An offline image annotation tool for object detection and segmentation.
To download RectLabel apps.
Post the problem to our Github issues.
Have questions? Send an email to support@rectlabel.com.
Load Cellpose ONNX Model
Read Cellpose CPP Wrapper for macOS and Ubuntu GPU.
Select a model.
Select a create type.
Create using Cellpose.
- The first channel is for the cytoplasm and the second channel is for the nuclear.
- Increase the diameter to detect larger cells, decrease the diameter to detect smaller cells.
- Increase the flow threshold to increase the number of detections.
- Increase the min size not to detect cells which are less than the min size.
- Press start button to start downloading the model and processing the image.
View menu.
- “Focus box” to quick zoom to the selected polygon/pixels.
- “Hide other boxes” to hide other polygons.
- “Hide pixels” to toggle pixels alpha.
- “Show small pixels” to show small pixels areas.
- “Show other pixels” to show other pixels objects.
- “Show indexes on labels table” to show each row number on the labels table.
- “Show checkboxes on labels table” to show a checkbox to show/hide for each row on the labels table.
- “Show depth image” to show the predicted Cellpose.